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The grandfather of distributed computing projects, SETI @ home, shuts down, Ars Technica

The grandfather of distributed computing projects, SETI @ home, shuts down, Ars Technica

      Nobody @home –

             

While SETI may no longer be an option, Folding @ home wants your cycles.

      

      

        

While it’s on hiatus, users with a fondness for distributed computing might take a look at Folding @ home, which is trying to figure out the structures of proteins on the surface of the SARS-CoV-2 coronavirus.

The SETI @ home’s

project page describes the reason for the shutdown simply. Over the years, home users have done so much processing that the team now has a large backlog of processed data to analyze. So, the researchers are de-prioritizing the management of the data distribution and focusing instead on looking at what has already been done in the hope of getting their analysis published in an academic journal. As a result, no more work units will be distributed after the end of March.

If you are looking for an alternative distributed-computing project, Folding @ home is looking for help with tackling an issue of major public importance at the moment: the structure of key proteins on the surface of SARS-CoV-2. The coronavirus uses these proteins to latch on to proteins on the surface of human cells, a key step in its ability to infect them.

Understanding the structure of this protein is a key to understanding the virus’ vulnerabilities. While it won’t help in the production of a general vaccine, it can be extremely useful in developing therapies. Once we know where this protein interacts with its receptor on human cells, we can start searching for small molecules that could bind in this same location, potentially blocking this interaction. Alternatively, we can potentially generate antibodies that bind to this site on the virus’ protein. Either of these options can help people who are already infected, as they can limit the virus’ ability to spread to new cells.

Fortunately, research on SARS-CoV-2 is moving incredibly quickly, and biologists have been keeping pace with the computers here . Structural details of the key protein on the surface of the virus have already been published , allowing researchers the chance to start considering ways of interfering with its infection.

That doesn’t mean any results from Folding @ home are now useless, though. The existing structure provides a valuable check on the results derived from computation, and it’s much easier to try alternative configurations — complexed with proteins on the cell’s surface, and even complexed with potential drugs, to give two examples — using computers than it is to confirm the results via biochemistry.

                                                    

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